Perl script for printing and manipulating MrBayes tree files (*.t, and *.con files), MrBayes parameter files (*.p files), or other Nexus- formatted tree files. Can also handle output from BEAST (*.trees and *.log files)

Johan Nylander

• burntrees.pl -- the Perl script

• burntrees.txt -- documentation in text format

• burntrees.html -- documentation in html format

• catmb.pl -- Perl script for concatenating files using burntrees.pl

• catmb.txt -- documentation in text format

• catmb.html -- documentation in html format

• data.t, data.p -- test data

Make sure the file burntrees.pl is executable (chmod +x burntrees.pl) and

./burntrees.pl

Perl script for concatenating several MCMC runs.

In order for catmb.pl to work, burntrees.pl must be installed in the $PATH. Alternatively, the full path to burntrees.pl can be specified by editing catmb.pl. (Then chmod +x catmb.pl) and

./catmb.pl