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my_checksum

Generate an excelsheet with the MD5 checksum of all files inside the provided path.

objpredict

App used to train classifiers of images based on Hu and Zernicke invariant moments.

onefilers

Single file modules

organoid_analyzer

Segmenter and morphological analyzer for organoids.

pemv2

sytems-level diffusion analysis for single particle tracks undergoing normal/non-normal diffusion that can transition between diffusion states (https://journals.aps.org/pre/abstract/10.1103/PhysRevE.94.052412)

planets-acorbat

programming_formalisms

Repository for the Programming Formalisms course

programming_formalisms_testing

Lesson 'testing' of the UPPMAX Programming Formalisms course

pyper

Pipeline structure for concatenating functions with different parameters for analysis.

radiobiologia

Notebooks interactivos para entender mejor radiobiología

risk_and_req_acorbat

Short document to list and plan projects.

slackonlan

Combining a slack bot with wake-on-lan capabilities

teaching

Small package to upload teaching examples of several different things.

tesis_doctoral

Mi tesis doctoral sobre Microespectroscopía aplicada a la cuantificación y modelado de la propagación de señales en redes biológicas.

tesis_licenciatura

My Licenciatura Thesis

tracker

Small package used to track and characterize trajectories.

trex

Simultaneous lineage TRacking and EXpression profiling of single cells using RNA-seq

web

Project SOMA web site

yeast_classification

Files used to asses different classifiers applied to Hu moments of yeast cells