abremges Goto Github PK

2015-biogas-cebitec

Bremges et al. (2015). GigaScience, 4:33.

2015-pseudo

abremges.github.io

Personal homepage

academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

alignment-and-variant-calling-tutorial

basic walk-throughs for alignment and variant calling from NGS sequencing data

andi

Efficient Estimation of Evolutionary Distances

annotaxor

Kraken-style taxonomic annotation using a protein database

awesome-d3

A list of D3 libraries, plugins and utilities

bashplotlib

plotting in the terminal

bioboxes.org

The website for bioboxes

blast2bam

camiprofilingtools

A collection of scripts for manipulating CAMI profiling files

checkm-genome

chrisquince.github.io

clonalframeml

ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes

command_line_bootcamp

Command-line bootcamp adventure in your browser

concoct

Clustering cONtigs with COverage and ComposiTion

cytoscape.js

Graph theory (a.k.a. network) library for analysis and visualisation (compatible with CommonJS/Node.js, AMD/Require.js, npm, Bower, spm, jspm, Meteor/Atmosphere, jQuery, and plain JS/JavaScript)

dnaplotlib

DNA plotting library for Python

docker-unicycler

Docker container for the Unicycler hybrid assembler

fermi

gbproks

Prokaryotic Genbank Downloading and Processing Tools

ggjoy

Geoms to make joy plots using ggplot2

hack

A typeface designed for source code

holy-build-box

System for building cross-distribution Linux binaries

innuca

INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

jellyfish

A fast multi-threaded k-mer counter

kd-tree-evaluation

kgrep

Roughly speaking, a 'grep' for k-mers

klib

A standalone and lightweight C library