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Stephen Zhang's Projects

approxbayes.jl icon approxbayes.jl

Approximate Bayesian Computation (ABC) algorithms for likelihood free inference in julia

atac icon atac

ATAC-Seq Transcription Factor Footprint Discovery and Analysis

beeline icon beeline

BEELINE: evaluation of algorithms for gene regulatory network inference

boolode icon boolode

Git Repo for simulating Boolean Models

bot-source-archiver icon bot-source-archiver

source code archiver for win32 platform. dependent on winRAR (http://www.rarlab.com/download.htm)

cespgrn icon cespgrn

CeSpGRN: Inferring cell specific GRN using single-cell gene expression data

code-for-the-world icon code-for-the-world

A tutorial for Advanced Scientific Python Programming on organizing, documenting, and distributing code

dataquery icon dataquery

a windowed console mode application base, originally intended to be a command line database application

enigpad icon enigpad

enigma encryption tool, simulating the enigma machine as described on Khan Academy

grisli icon grisli

GRISLI: Gene Regulation Inference for Single-cell with LInear differential equations and Peanian kernel velocities

hard86 icon hard86

Intel 8086 emulator in C/C++ with support for virtual devices

hypergraphs.jl icon hypergraphs.jl

A package to represent high-order relationships between objects of any type

informationmeasures.jl icon informationmeasures.jl

Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.

kissabc.jl icon kissabc.jl

Pure julia implementation of Multiple Affine Invariant Sampling for efficient Approximate Bayesian Computation

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