Comments (2)
I changed the environment and tried to install scdeepsort-cpu version. But another error occured.
Python 3.8.10 (default, Jun 22 2022, 20:18:18)
[GCC 9.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import deepso
2022-09-20 20:02:27.975542: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last): File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/backend/tensorflow/tensor.py", line 31, in <module> import tfdlpack ModuleNotFoundError: No module named 'tfdlpack'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/yangyuan/.local/lib/python3.8/site-packages/deepsort/__init__.py", line 1, in <module> from .predict import DeepSortPredictor
File "/home/yangyuan/.local/lib/python3.8/site-packages/deepsort/predict.py", line 1, in <module> import dgl
File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/__init__.py", line 8, in <module> from .backend import load_backend, backend_name
File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/backend/__init__.py", line 74, in <module> load_backend(get_preferred_backend())
File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/backend/__init__.py", line 23, in load_backend mod = importlib.import_module('.%s' % mod_name, __name__)
File "/usr/lib/python3.8/importlib/__init__.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level)
File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/backend/tensorflow/__init__.py", line 4, in <module> from .tensor import *
File "/home/yangyuan/.local/lib/python3.8/site-packages/dgl/backend/tensorflow/tensor.py", line 33, in <module> raise ImportError('Cannot find tfdlpack, which is required by the Tensorflow backend. '
ImportError: Cannot find tfdlpack, which is required by the Tensorflow backend. Please follow https://github.com/VoVAllen/tf-dlpack for installation.
What I'm confused about is that the author of tf-dlpack VoVAllen said that the project is no longer active and I cannot install it following the code.
from scdeepsort.
You can try python 3.7.6. By the way, please set the default backend to "pytorch" for dgl.
from scdeepsort.
Related Issues (20)
- scDeepSort-v1.0-cu102.tar.gz cannot be downloaded HOT 2
- AttributeError: module 'dgl.backend' has no attribute 'is_tensor' HOT 4
- Learnable sharing parameter Beta HOT 1
- Edges for testing HOT 1
- Pytorch 1.6.0 installation fails HOT 1
- testing my own model
- Fails to import. DGL dependency problem HOT 1
- Trainer AssertionError HOT 1
- Trainer.py TypeError: '>' not supported between instances of 'str' and 'int'
- What is a supported version? HOT 1
- how to save my own model? HOT 2
- Deepsort problem HOT 3
- The impact of different inputs on the prediction outcome HOT 1
- NameError: name 'predictor' is not defined
- DGLError in scdeepsort-cpu train function
- how to train my own model. HOT 1
- Repeated Training, wrong number of different celltypes HOT 2
- retrain model HOT 5
- about PCA and test set;
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from scdeepsort.