zhengyunchao Goto Github PK

allbiotc2

Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.

antihypertensive-med

Repository containing the code for the paper: "Investigating the potential effects of antihypertensive medication on psychiatric disorders: a mendelian randomisation study"

cytoplasmic_mutations_induced_by_gamma_rays_in_rice

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

gatk4-mitochondria-pipeline

This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflows collection.

gnomad-mitochondria

heritable_mutations_induced_by_ion_beams_in_rice

machine_learning_derivation

notes of machine learning algorithm derivation

mosaicforecast

A mosaic detecting software based on phasing and random forest

mutmap

MutMap pipeline to identify causative mutations responsible for a phenotype

scan-snv

Single cell somatic genotyper

sentieon-scripts

Helper scripts for biological data processing from Sentieon

svision

Detecting genome structural variants with deep learning in single molecule sequencing

utils

misc utility scripts

zhengyunchao.github.io

myfirstblog

zjunet

Command Line Scripts for ZJU (VPN / WLAN / DNS)