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Qichang Zhao's Projects

attentiondta_bibm icon attentiondta_bibm

AttentionDTA: prediction of drug–target binding affinity using attention model.https://ieeexplore.ieee.org/abstract/document/8983125

attentiondta_tcbb icon attentiondta_tcbb

AttentionDTA: drug--target binding affinity prediction by sequence-based deep learning with attention mechanism

autoslim icon autoslim

A pytorch toolkit for structured neural network pruning automatically

brns_-ssfsm-dti icon brns_-ssfsm-dti

BRNS_SSFSM-DTI: A hybrid method for drug-target interaction prediction based on balanced reliable negative samples and semi-supervised feature selection

coldstartcpi icon coldstartcpi

ColdstartCPI:Improving compound-protein interaction prediction under cold-start scenarios by pretrain feature engineering

cpi_prediction icon cpi_prediction

This is a code for compound-protein interaction (CPI) prediction based on a graph neural network (GNN) for compounds and a convolutional neural network (CNN) for proteins.

cpr_datasets icon cpr_datasets

The datasets used in Section5 of "Biomedical data and deep learning computational models for predicting compound-protein relations"

dba icon dba

DBA: Averaging for Dynamic Time Warping

examples icon examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

gifdti icon gifdti

GIFDTI: Prediction of drug-target interactions based on global molecular and intermolecular interaction representation learning

git-recipes icon git-recipes

🥡 Git recipes in Chinese by Zhongyi Tong. 高质量的Git中文教程.

hpyerattentiondti icon hpyerattentiondti

HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repository contains the source code and the data.

ivpgan icon ivpgan

Integrated View Predictive GAN for Drug-Target Indication Prediction

mat icon mat

The official implementation of the Molecule Attention Transformer.

moltrans icon moltrans

MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction

monn icon monn

MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Proteins

padme icon padme

This is the repository containing the source code for my Master's thesis research, about predicting drug-target interaction using deep learning.

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