Comments (3)
Uz-Hakim
commented on August 16, 2024
Trying to load the first 10 json files of my synth data returns an error:
File "load_ten_json_test.py", line 84, in <module>
X, Y = file_io.load_raw_json_db(datadir)
File "C:\Users\uzair\Desktop\stormnet_test\STORM-Net-master\CapCalibrator\file_io.py", line 273, in load_raw_json_db
timesteps_per_sample = X[0].shape[0]
IndexError: list index out of range
Investigating further shows the valid stickers in each file:
[False, False, False, False, False, False, False]
[False, False, False, False, False, False, False]
[False, False, False, False, False, False, False]
[False, False, False, False, False, False, False]
[False, False, False, False, False, False, False]
[False, False, False, False, False, False, True]
[False, False, False, False, False, False, True]
[False, False, False, False, False, False, True]
[False, False, False, False, False, False, True]
[False, False, False, False, False, False, True]
In comparison synthetic data generated from the provided template file gives all true for valid_stickers and the json files load fine.
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Uz-Hakim
commented on August 16, 2024
This seems to occur only when using the command line to run the training via train.py script. Using the gui interface which seems to call torch_train.py (rather than train.py) seems to load data fine
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yoterel
commented on August 16, 2024
Hi there, torch_train.py is indeed the correct training script, the train.py script is deprecated.
I will move it into a legacy folder to avoid this problem in the future, sorry for the misunderstanding.
also updated README to reflect this.
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Related Issues (11)
- Support template files with arbitrary point-of-interest names HOT 1
- what MRI scans are used for the transform? HOT 1
- Training model with gpu, incorrect batching? HOT 4
- Render time synthetic data HOT 3
- What are the exact inputs for the GUI in the offline step? HOT 1
- Can't activate STORM - problem with torch HOT 1
- Problem with json files created in the rendering of synthetic data/ Offline Step HOT 6
- UnicodeDecodeError when redering synthetic data HOT 5
- Coordinates type after the last online step HOT 1
- How can I make my own template for the offline step? HOT 1
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