Name: Jinliang Yang
Type: User
Company: University of Nebraska-Lincoln
Bio: I am a father, a plant geneticist, and a data hacker. I am interested in using statistical approaches to disentangle biological questions.
Location: Lincoln, NE
Blog: http://jyanglab.com
Jinliang Yang's Projects
AGRO-932 lab materials
twitter hashtag #actuallivingscientist
computational lab for AGRO-932
Program for analysing NGS data.
Wrapper scripts and documentation to make angsd more usable
An experimental open-source attempt to make GPT-4 fully autonomous.
A Variant Caller, Distributed. Apache 2 licensed.
R Package Implementing High Dimensional Bayesian Mediation Analysis
Python (PyMC) adaptation of the R code from "Doing Bayesian Data Analysis"
Bayesian hierarchical model for complex trait analysis
Best-practice pipelines for fully automated high throughput sequencing analysis
Tools for bioinformatics
MATLAB source code to accompany the PLoS Genetics paper, "Integrated enrichment analysis of variants and pathways in genome-wide association studies indicates central role for IL-2 signaling genes in type 1 diabetes, and cytokine signaling genes in Crohn's disease".
CGAT - Computational Genomics Analysis Tools
My Blog in Chinese
Automatically exported from code.google.com/p/dadi
Importing and Analysing DArT type snp and silicodart data
DeepDive
Deep learning in R using existing software. For self learning purposes.
RNA-seq pipeline for UCD farm job submission
This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'
An R package to submit pipeline on farm for genomic and genetic analysis.
Watches and synchronizes a local folder with a remote folder via another server over ssh
Genome-wide Efficient Mixed Model Association