About the CIBERSORT used in your paper about music HOT 8 CLOSED

What's more, the package "MuSiC" cannot be installed in Windows system (I tried several times and failed finally), but works well in Linux system. Is that right?

from music.

Hi Fei,

Thanks for using MuSiC. CIBERSORT has their own website that will generate signature matrix from single cell reference.
MuSiC should be working under Windows system. Could you please provide more info on that?

Best,
Xuran

from music.

from music.

Hi Fei,

Sorry, I could not see the image. Yes, I have installed my package on my own computer and my labmates' computers. They are under Windows system.

from music.

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devtools::install_github('xuranw/MuSiC')
Error in read.dcf(path) :
Found continuation line starting ' plyr, ...' at begin of record.

I'm pretty sure that is the error Fei is referring too, as I too just got that error.

Thanks

from music.

Thanks for using MuSiC. Actually I'm not sure what happened.

After searching on Internet, Here is the proposed solution:
library(remotes)
install_url(url="https://github.com/xuranw/MuSiC/archive/master.zip", INSTALL_opt= "--no-multiarch")

Hope that helps.

Best,
Xuran

from music.

Thanks. That fixed the issue.

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