xiaojieqiu Goto Github PK

2019_sbp_vector_calculus_repro

Basic vector calculus theorems (existence of scalar and vector potentials, Helmholtz Hodge decomposition) in the context of classical finite difference SBP operators

3d-photo-inpainting

[CVPR 2020] 3D Photography using Context-aware Layered Depth Inpainting

an-introduction-to-applied-bioinformatics

Interactive lessons in bioinformatics.

awesome-geospatial

Long list of geospatial tools and resources

awesome-multi-omics

List of software packages for multi-omics analysis

awesome-neural-ode

A collection of resources regarding the interplay between ODEs, dynamical systems and neural networks

awesome-research-proposals-guide

A guide to improve your research proposals.

blender_ue4_vectorfieldeditor

Blender addon that adds support for working with 3D vector fields using the FGA file format.

brainmapr

R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data with in situ RNA patterns from the Allen Developing Mouse Brain Atlas

cas9fatemapping

Collection of code for the GESTALT fate mapping paper using the CRISPR/Cas9 system

census_beam

Cenus / BEAM paper's github repo for reproducing all figures / tables

cite-seq-count

Small script that allows to count TAGS from a CITE-seq experiment

code-review-pull-request

Perform automatic code reviews for GitHub pull requests (PR). The review is triggered when a PR is created and is triggered again for every subsequent commit in the PR. It will review each changed file in the PR.

coexpressionnetworkrproject

R code for micro array vs rnaSeq coexpression network research

conservative_autoencoder

curved-quivers

Matplotlib function to represent a vector field with path-following arrows

deepbind

I have put my modified version of the deepbind code here.

deepbind-1

Training and testing of DeepBind models.

delorean

R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experiments.

densityclust

Clustering by fast search and find of density peaks

doctut

repo for learning readthedocs

dynamo-release

Inclusive model of expression dynamics with scSLAM-seq and multiomics, vector field reconstruction and potential landscape mapping

fastproject

Dimensionality reduction for single cell RNA-seq data

fusenet

Gene network inference by fusing data from diverse distributions

gganatogram

Create anatograms using ggplot2

github-actions-for-packages

github-pr-review

github-pr-review

github-pr-summary

github-pr-summary

github_test

This repository is used to test all github operations

gnns-recipe

A recipe to study Graph Neural Networks (GNNs)