Comments (1)
xavierdidelot
commented on June 30, 2024
No, the sampling time is not added to the generation time.
So for example if you set the two distributions to be the same (which is what happens by default) then transmission is equally likely to happen before or after sampling.
There are some situations where we would want this behaviour.
If you want transmission to be more likely to happen before sampling for your TB analysis, you can make this happen by setting the sampling distribution to have a higher mean than the generation time distribution.
If you wanted to have the sampling time be added to the generation time, there would need to be changes to the code.
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