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bioc-intro

Bioconductor data science introduction

computationalgenomicsmanual

Robs manual for the computational genomics and bioinformatics class.

digipathos

Brazilian Agricultural Research Corporation (EMBRAPA) fully annotated dataset for plant diseases. Plug and play installation over PiP.

encode-data-usage-examples

learningr

Code to get started with a new RStudio project along with data

linear-models-r

Going beyond the t-test in R and introducing linear regression and ANOVA (http://tinyurl.com/linear-models-r)

melbioinf_docs

Melbourne Bioinformatics documentation in markdown format

ml-youtube-courses

📺 A place to discover the latest machine learning courses on YouTube.

mothur

Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.

ngs-in-bioc

A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor

ngs-introduction-training

q2galaxy

Generate Galaxy tool descriptions automatically from QIIME 2 actions.

qiime2

Official repository for the QIIME 2 framework.

qiime2r

Import qiime2 artifacts to R

r_tips

A repository of R usage tips for data cleaning, data mining, data visualisation, statistical inference and machine learning

rockefelleruniversity.github.io

shell_intro_for_bioinformatics_stg

Intro to Shell for Bioinformatics - with STG examples

spades

SPAdes Genome Assembler

sql_course

Course material for my Intro to SQL Course, including the textbook: The Necessary SQL, featuring MySQL and T-SQL.

stat_rethinking_2023

Statistical Rethinking Course for Jan-Mar 2023

teaching_ml

repository of resources for teaching Machine Learning

tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

training-collection

Collection of bioinformatics training materials

training-material

A collection of Galaxy-related training material

tutorials

Galaxy-Australia training