williamgilpin Goto Github PK

ai-feynman

alveoli

Oscillating alveoli model

angdim

bioinformatics-algorithms

cellaut

Simple implementations of cellular automata for image processing and simulation

cfgen

Parse a text corpus and generate sentences in the same style using context-free grammar combined with a Markov chain.

chaotic_ecosystem

Mathematica code for analysis of a chaotic ecosystem model

codebits

Small scripts and helper functions that help me get things done (various languages)

convoca

Predict and analyze cellular automata using convolutional neural networks

cphy

Class materials for computational physics course

cs231n

My solutions to the assignments for Stanford's CS231n (Spring 2018)

data-science-cheatsheet

A helpful 5-page machine learning cheatsheet to assist with exam reviews, interview prep, and anything in-between.

degas

Plotting utilities for matplotlib

diccor

A set of MATLAB routines for generating displacement vector fields from black and white time series of images.

dysts

More than a hundred strange attractors

dysts_data

Data files for the main dysts repository

exrepo

An example Python repository

flowtrace_docs

Documentation for flowtrace, simple visualization of biological fluid flows in MATLAB, Python, and ImageJ

flowtrace_imagej

ImageJ / Fiji implementation of time-resolved flow tracing.

flowtrace_matlab

MATLAB implementation of time-resolved flow tracing.

flowtrace_python

Python implementation of time-resolved flow tracing.

fnn

Embed strange attractors using a regularizer for autoencoders

fracdiff

A set of tools for simulation of fractional Brownian motion

gspie

A variable-timestep implementation of the Gillespie SSA for stochastic chemical reaction simulations.

howto

How to do various tricky computer things

hspmc

Monte Carlo simulation of hard sphere packing using MATLAB

identify-snps-in-nanopore

illotka

Simulate the ill-conditioned Lotka-Volterra model

juliadynamics

Website for JuliaDynamics and various resources, like notebooks, videos, etc.

kurep_paper

Code to create avalanches in a repulsive oscillator model.