Comments (4)
from reflow.
Need to add the original compensation matrix, if present, to the cleaned FCS file. This is usually stored in the $SPILL metadata key/value.
from reflow.
Added original spillover matrix in 1c4e697
But, the $PnR values need to be set differently to match the original files. A lot of cytometers use 262144 for this value. I'll calculate the max value and set all $PnR values to 262144 if the true max is below that value. If the true value is above, I'll use the real max value.
from reflow.
feature completed in 424718e
from reflow.
Related Issues (20)
- Add sorting to the various tables HOT 1
- Allow users to change passwords HOT 1
- Bind keys to various form actions (e.g. <Enter> to save form)
- Allow creation of new ReFlow users HOT 1
- Expose random seed and sub-sample count for both stage 1 & 2 processing HOT 2
- Sample upload allows selecting file when cytometer is not chosen HOT 1
- Firefox on Windows doesn't download FCS files with the correct file name HOT 1
- Add original compensation to clean FCS export
- Allow selection of multiple cell subsets for stage 2 analysis
- Add asinh pre-scale factor to PR inputs
- Add panel variant to the first step of PR wizard
- Update project dependencies - 2015
- CSV download of PR results HOT 1
- Worker dashboard
- Time-out redirection still not working for all views
- Document Panel Template & Sample Annotation rules
- Option for creating multiple PRs simultaneously
- Disable/Enable workers from ReFlow server
- Error editing FCS sample
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from reflow.