Comments (2)
Hey Max,
Yes, I've known about the new 3.2 version and read through the spec doc. Agreed, the mixed datatype will require an overhaul to the FlowIO code. The issue is I haven't been able to find any example 3.2 files. I think there's only 1 BD cytometer that exports these files, but could be wrong about that. In any case, we need one or more example files, specifically ones that are public & showcase the new features so we can add them to the repo with test cases. Ideally, it would be nice if they weren't ginormous. Do you have access to any that you can share?
Regards,
Scott
from flowio.
Hey Scott,
I got a few files from a BD S8 cytometer, but I have to check back if they can be made public and I'm not sure if they showcase all the new stuff. Also they have some values, like range limits, which seem very odd to me. I let you know if I can provide some samples. Thanks for letting me know that you are aware of the new standard.
from flowio.
Related Issues (15)
- Removing a channel HOT 2
- Missing set zeroes if data offsets are greater than header max data size HOT 3
- Error when exporting some FCS files: REPORT BUG: error calculating text offset
- Open files containing multiple datasets HOT 5
- Getting event data as an Int but expecting a float? HOT 2
- Missing license HOT 5
- Clarify parsing of examples/fcs_files/100715.fcs HOT 4
- Better handling of data section byte offset discrepancy
- Incorrect estimation of data_stop HOT 7
- Question about flow cytometry data HOT 1
- Issue loading fcs files HOT 5
- FlowData.write_fcs attempts to write strings to file opened in binary mode HOT 5
- write_fcs mixes up PNN and PNS labels HOT 1
- Parsing an FCS file with variable int sizes fails raises an exception (and it could parse much faster) HOT 3
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