weilandtd Goto Github PK
Name: Dr. Daniel Weilandt
Type: User
Bio: Systems Biology researcher developing open software and methods to deceiver metabolism for healthcare and biotech applications.
Twitter: realDRWeilandt
Dr. Daniel Weilandt's Projects
blood-gas
cobrapy
COBRApy is a package for constraint-based modeling of biological networks
competitive_catabolism
Models and analysis for the paper on competitive catabolism
diffeqbiological.jl
DiffEq related functionality for defining biological models
e005-circadian-timecourse
eb_kinetics2
This repository contains all code used in the following paper to describe reversible electron bifurcation with refilling. https://doi.org/10.1016/j.chempr.2021.03.016
elmaven
LC-MS data processing tool for large-scale metabolomics experiments.
lactate_homeostasis
A reductionist whole-body model for lactate homeostasis
mpi_summer_school_group_4
openfpm_pdata
Distributed data structure
pysb
Python framework for Systems Biology modeling
pysoscope
pytfa
A Python 3 implementation of Thermodynamics-based Flux Analysis
rab_jp
Code for junior paper under supervision of Joshua Rabinowitz
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
surftools
sympler
SYMPLER: SYMbolic ParticLE simulatoR
tca_fluxes
TCA Flux calculations for Bartman et al. Nature (2023)
yeast-gem
The consensus GEM for Saccharomyces cerevisiae
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