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3dfi

The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.

algorithm

算法刷题笔记

algorithm_you_need

刷算法题（全部总结）

alphabio

alphafold

Open source code for AlphaFold.

alphafold_pytorch

An implementation of the DeepMind's AlphaFold based on PyTorch for research

awesome-big-models

A collection of AWESOME things about BIG AI models.

awesome-chinese-llm

整理开源的中文大语言模型，以规模较小、可私有化部署、训练成本较低的模型为主，包括底座模型，垂直领域微调及应用，数据集与教程等。

awsome-leetcode

Let's leetcoding.

bio-transformers

bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.

comments

ctg-latentaes

[Paperlist] Awesome paper list of controllable text generation via latent auto-encoders. Contributions of any kind are welcome.

debug

模型训练时候出现的Bug，以及解决方法

deeplearning_framework

深度学习框架详解

deeplearningknowledge

深度学习相关算法总结

drug-design-deep-learning

ecnet

An evolutionary context-integrated deep learning framework for protein engineering

flip

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

fungenetyper

gpt-neo

An implementation of model parallel GPT-2 and GPT-3-style models using the mesh-tensorflow library.

gremlin_cpp

GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!

gremlins

Gremlins is a python framework for fault-testing distributed systems

interpretmutations

A formalism for understanding the contributions of different factors to the mutational effects predictions

jax-unirep

Reimplementation of the UniRep protein featurization model.

knowledge

模型训练的各种有意思的知识分享

leetcode-master

《代码随想录》LeetCode 刷题攻略：200道经典题目刷题顺序，共60w字的详细图解，视频难点剖析，50余张思维导图，支持C++，Java，Python，Go，JavaScript等多语言版本，从此算法学习不再迷茫！🔥🔥 来看看，你会发现相见恨晚！🚀

leetcodetop

汇总各大互联网公司容易考察的高频leetcode题🔥

llm

The Roadmap for LLMs

massa

mesh-transformer-jax

Model parallel transformers in JAX and Haiku