Comments (10)
Hi Vincent and Jairo,
I've tested the latest version and it does indeed work with my files. I appreciate all your efforts in addressing this issue.
Take care,
Calvin
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Hi Calvin,
A sample file would be of help to replicate your issue and looking for a solution. Can you provide that? Part 1 metadata would be enough (files stored in the "meta/basic" folder). Thanks.
Best,
Jairo
from ggir.
Hi Jairo,
Thanks for your reply. I've sent the file to your email. Let me know if you need any other files to replicate the issue!
Calvin
from ggir.
from ggir.
Hi Calvin,
I'm sorry I can't see your file in any of my emails. Can you share a link to download the file?
Best,
Jairo
from ggir.
from ggir.
@nivlacdiep could you try again with the latest GGIR version? We fixed a bug related to aligning part 3, 4 and 5 output, which may explain your issue.
from ggir.
Hi Vincent and Jairo,
Unfortunately the same error comes up, even with the new version 2.8-6
Error in [<-
(*tmp*
, di, fi:(fi + 2), value = c(ID, fnames.ms3[i], :
subscript out of bounds
What other files or metadata can I send to you for further investigation?
from ggir.
Hi, I tried to download the data some days ago but I had no access. Just tried again and still the same, can you either grant me access or send this to my email ([email protected]) so that I can have a look?
from ggir.
Hi @nivlacdiep this issue is closed because Jairo and I fixed it on Friday. To test it, please install master branch, re-start R and try again: remotes::install_github("wadpac/GGIR")
. Let us know if the problem returns.
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Related Issues (20)
- Non-wear detection in the middle of the SPT window
- Replace visualreport by a report that aligns with the rest of GGIR HOT 1
- part3 plot error: seq.int(0, to0 - from, by) : 'to' must be a finite number
- Improve clipping (problematic data) detection
- part5 data dictionary generation errors when not part 5 output available
- Discrepancy in MVPA between different input methods HOT 8
- 1:dummywake errors in part 5
- object 'DAYL5HOUR' not found" in part 2
- Error in as.POSIXlt.numeric(x) : 'origin' must be supplied (for older R versions) HOT 1
- Inform user when a sleeplog timestamp is in incomprehensible format
- Sleep Log Intergration under GGIR Version 3.1.2 HOT 3
- advanced sleeplog dates not correctly treated when recording starts at midnight
- Facilitate AMI Motionlogger csv format
- g.part5.wakesleepwindows fails at rounding timestamps to seconds HOT 3
- Ignore last night in part 5 when doing WW analysis and recording ends after midnight but before 7am HOT 2
- Standardise date and filename formats in reports from part 2, 4, 5, and 6
- g.part5.addfirstwake fails if there are no SIBs in the first hours of recording
- Spikes in some GENEActiv raw data during non-wear HOT 1
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- Add functionality for Actical, Fitbit and Philips Health Band
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