vuqv Goto Github PK
Name: Quyen Vu
Type: User
Company: Penn State University
Location: USA
Blog: https://vuqv.github.io/
Name: Quyen Vu
Type: User
Company: Penn State University
Location: USA
Blog: https://vuqv.github.io/
A beautiful, simple, clean, and responsive Jekyll theme for academics
Resources, Code, and Other things I use to teach Cheminformatics.
COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM
This repository contains implementations and illustrative code to accompany DeepMind publications
script to analyze entanglement in protein structure
Entanglement information from AlphaFold structures
Force fields in various formats
MDToolbox.jl: A Julia package for molecular dynamics trajectories analysis and modeling of biomolecules
Implementation of MOFF force field. Please cite us at Latham, A; Zhang, B J. Chem. Theory Comput. 2021, 17, 3134. (https://pubs.acs.org/doi/abs/10.1021/acs.jctc.0c01220)
An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM
An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Proof-of-concept for the OpenMM Cookbook
OpenMM tutorial for the MSBS course
Quickstart Python tutorials helping molecular dynamics practitioners get up to speed with OpenMM
Development version of plumed 2
Config files for my GitHub profile.
Python library to run structure based model (SBM) simulations using the OpenMM toolkit
End-To-End Molecular Dynamics (MD) Engine using PyTorch
Example to fit parameters and run CG simulations using TorchMD and Schnet
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.