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Dinghua Li's Projects

apollo icon apollo

An open autonomous driving platform

autoware icon autoware

Open-source software for urban autonomous driving

bwa icon bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

bwt-sw icon bwt-sw

BWT-SW - A Practical Local Alignment Tool that Finds All Alignments

fermi-lite icon fermi-lite

Standalone C library for assembling Illumina short reads in small regions

filterpy icon filterpy

Python Kalman filtering and optimal estimation library. Implements Kalman filter, particle filter, Extended Kalman filter, Unscented Kalman filter, g-h (alpha-beta), least squares, H Infinity, smoothers, and more. Has companion book 'Kalman and Bayesian Filters in Python'.

gcc-4.9.2-boost-1.57 icon gcc-4.9.2-boost-1.57

Bash script to install gcc-4.9.2 and boost-1.57 on CentOS 5.x, CentOS 6.x and Mac OS X. Languages: c++, c and go. Includes tcmalloc on linux.

kubernetes icon kubernetes

Production-Grade Container Scheduling and Management

kxsort icon kxsort

Fast in-place radix sort with STL-like API

megahit icon megahit

Ultra-fast and memory-efficient (meta-)genome assembler

miniasm icon miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

minimap2 icon minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

mxnet icon mxnet

Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Scala, Go, Javascript and more

osqp icon osqp

The Operator Splitting QP Solver

pavian icon pavian

Interactive analysis of metagenomics data

resume icon resume

Software developer resume in Latex

ros_comm icon ros_comm

ROS communications-related packages, including core client libraries (roscpp, rospy, roslisp) and graph introspection tools (rostopic, rosnode, rosservice, rosparam).

sfb icon sfb

Flappy Bird clone, written in GNU sed

smartdenovo icon smartdenovo

Ultra-fast de novo assembler using long noisy reads

soap3-dp icon soap3-dp

To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously.

sparsepp icon sparsepp

A fast, memory efficient hash map for C++

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