visionpathology Goto Github PK

deep-histopath

A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge

deephe

deeppath

Classification of Lung cancer slide images using deep-learning

ec2-setup-sos-workflow

Automatic setup of EC2 instances and EBS volumes via SoS Workflow

histocartography

Histocartography is a framework bringing together AI and Digital Pathology

histolab

Library for Digital Pathology Image Processing

interpretai_digipath

Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021

kaggle_sandbox

a starting point for Kaggle attempt :]

medical-imaging

ML-based medical imaging using Azure

meditorch

A PyTorch package for biomedical datasets processing, development and testing.

pathml

Tools for computational pathology

python-wsi-preprocessing

Python Whole Slide Image Preprocessing

tiatoolbox

Computational Pathology Toolbox developed by TIA Lab

toad

AI-based pathology predicts origins for cancers of unknown primary - Nature

torchio

Medical image preprocessing and augmentation toolkit for deep learning

tutorials

MONAI Tutorials

wsi-preprocessing

Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning

wsi-preprocessing-sos-workflow

A pipeline to preprocess whole-slide images (WSI) towards deep learning

wsi-tile-cleanup

Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning