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applibtools-matlab

A Matlab package to manage applications and libraries

ca_source_extraction

Complete Matlab pipeline for large scale calcium imaging data analysis

did-matlab

Data Interface Database

direction_training_2008_2012

Before and after direction responses (Li/Van Hooser et al. 2008; Van Hooser/Li/Christensson et al. 2012)

example-data-for-tutorial

Example data for our tutorial at http://wiki.vhlab.org/data-analysis/using-the-vhlab-database/example-1-reading-from-a-database

hlab-carbonfiber

Carbon fiber electrode parts

jrclust

JRCLUST

microdrive-array

Microdrive array 3D CAD files

ndi-matlab

NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyses

ndicalc-vis-matlab

NDI calculator objects and documents for vision research

ndicalc-visbayes-matlab

NDI calculator objects and documents for vision research using Bayesian analysis

ndr-matlab

Neuroscience Data Readers - A Matlab conglomerative library for reading neuroscience data files

neuroscienceexperimentalmetadata

A proposed set of neuroscience metadata with public discussion

nif-ontology

NIF Standard Ontologies (NIFSTD)

quantifying_morphology

Software for STG neuron morphology (Sutton et al., 2016)

semi-circle-ferret-microdrive

Solidworks, STL files, and supplementary files/ papers for creating a microdrive with thomas electrodes

srneuronanalysis

pyramidal neuron analysis code

stereo-gaze-tracking

high-speed stereo-eye tracking setup

test2

vhlab-animalmonitor-matlab

A simple Matlab program for displaying vital signs (EKG, EEG)

vhlab-code-labview

LabView code used and written by the VH Lab

vhlab-ffei-matlab

Code to simulate paired feed-forward excitatory and inhibitory inputs to neurons and circuits

vhlab-grading-matlab

Small programs / apps for grading

vhlab-library-matlab

VH Lab Matlab libraries; functions that manage and analyze VH lab experiments that are a less general than vhlab-toolbox-matlab

vhlab-microscopyimageanalysis-matlab

Matlab app for analysis of high density imaging data like that from Array Tomography

vhlab-newstim-matlab

A visual (and auditory) stimulus suite for Matlab that relies on Psychtoolbox

vhlab-nrsa-template

NRSA template organization for VH lab

vhlab-parts

Published parts (descriptions, 3D printing files, board schematics, etc) from VH Lab

vhlab-publishedstudies

Code for data analysis and figure generation from specific VH lab projects and collaborations

vhlab-runexperiment-matlab

A system for running and performing analysis for visual physiology experiments (visual stimulation, electrophysiology, 2-photon imaging)