Comments (1)
We've improved the mapping algorithm significantly since this was opened, and we're in the process of improving it even more. So this is complete.
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Related Issues (20)
- Some questions about the <vg call> commond output HOT 7
- vg call crash with "ERROR: Signal 6 occurred. VG has crashed." HOT 8
- I have a question while using vg. HOT 6
- I have a question while using vg HOT 1
- Variant Calling from HPRC Pangenome HOT 3
- ERROR: Tag "transcript_id" not found in attributes (line 145). HOT 3
- Release vg v1.57.0
- vg mpmap mapping reads to pan-transcriptom too slow HOT 8
- Hello, I want to get some information from Snarl file
- a problem about vg autoidex (v1.56.0) HOT 1
- Merge of different chromosome graph files HOT 2
- Program stuck at [IndexRegistry]: Chunking VCF(s) for days HOT 2
- vg alignments not reporting split reads HOT 1
- Mapping paired end reads with vg giraffe: "Falling back on single-end mapping" HOT 9
- Autoindex should parse tabix-indexed monolithic VCFs in parallel
- vg pack error HOT 3
- VCF file empty when calling SV on ONT data HOT 9
- vg map errors HOT 5
- Genotyping SVs in a minigraph-cactus graph yields many similar alleles in output vcf HOT 1
- How to align both long and paired end short reads using vg HOT 1
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