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U-BRITE's Projects

biocswirl icon biocswirl

The repository for the BiocSwirl content for the Ubrite hackathon 2022

canai icon canai

Comparing feature extraction methods for biomarker discovery in a prostate-cancer study.

hackin-omics-2022 icon hackin-omics-2022

A repository with details related to our hackathon including a list of projects, resources, and our goals.

herivar icon herivar

Quantifying the combined heritability of a trait based on a multi-ethnic LD panel with equal distribution of samples among each ancestry group.

mcircrna icon mcircrna

Integrating circadian transcriptomes with muscle snRNA-seq data

medvaisor icon medvaisor

MedvAIsor( Medicine + Advisor + AI) is AI-based personalized drug screening for cancer treatment

o-miner icon o-miner

Patient stratification and molecular mechanism identification using patient clinotypes and transcriptomics embeddings

reprocanatlas icon reprocanatlas

Identifying cancer-related signatures of endometrial and ovarian cancer to develop a reproductive cancer atlas.

rlhf_attis2023 icon rlhf_attis2023

Google Colab friendly version of TRL's https://github.com/lvwerra/trl/blob/main/examples/toxicity/scripts/gpt-j-6b-toxicity.py example for ATTIS 2023.

sigsplice icon sigsplice

Single Cell Splicing Analysis of Pancreatic Neuroendocrine Cancer

single-cell-reciter icon single-cell-reciter

Single-cell topics modeling using deep learning and multi-omics enrichment analysis.

snvariome icon snvariome

Integrating protein-protein interactions and protein structure to enhance the clinical variant interactome.

team-leaders-2022 icon team-leaders-2022

A repository to share resources and a readiness checklist with team leaders.

team_papaki icon team_papaki

Integrating multi-omics data with autoencoders for breast cancer survival prediction.

teamadguy icon teamadguy

Using Graph Neural Network to decrypt Personalized Medicare in Alzheimer's Disease

teamvecna-scdehashr icon teamvecna-scdehashr

Rshiny based Analysis and Visualization tool for single cell pooled sequencing data (Hashed data. e.g CITE-Seq)

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