TypeError: imread() got unexpected keyword arguments 'multifile' about decode HOT 4 CLOSED

@HypnosWei @JohannaRahm Sorry for the slow response, I overlooked this issue.
Yes, indeed the tifffile version can be fixed.
However there is some trouble with this package, but your command works. I will take a look and possibly pin it in the release.

from decode.

I get the same error, which seems to be related to the tifffile version. The error is caused with version 2022.8.12, but no error appears with version 2022.4.8.

A quick fix is to create an environment with set tifffile version
conda create -n decode_env2 -c turagalab -c pytorch -c conda-forge decode=0.10.0 cudatoolkit=11.0 tifffile=2022.4.8 jupyterlab ipykernel

Perhaps the package version could be restricted in the environment.yaml file?

from decode.

I get the same error, which seems to be related to the tifffile version. The error is caused with version 2022.8.12, but no error appears with version 2022.4.8.

A quick fix is to create an environment with set tifffile version conda create -n decode_env2 -c turagalab -c pytorch -c conda-forge decode=0.10.0 cudatoolkit=11.0 tifffile=2022.4.8 jupyterlab ipykernel

Perhaps the package version could be restricted in the environment.yaml file?

Thank you! it works, by the way, did you ever try the 2D images super-resolution on decode?

from decode.

fixed by release 0.10.1

from decode.