Comments (4)
See also #498 .
from tskit.
Also, this means that the calling convention for the C function tsk_treeseq_from_text()
is different from the Python tskit.load_text()
, which caught me out just now (as I don't think tsk_treeseq_from_text() is documented anywhere, so I looked at the Python docs instead)
from tskit.
tsk_treeseq_from_text() is different from the Python
It's deliberately not part of the API - parsing text in C is too hard to do properly. It's just for testing.
from tskit.
Right - makes sense. It would be nice to keep it in sync with the Python order of args to load_text()
though, when this issue is resolved. It's pretty confusing otherwise.
from tskit.
Related Issues (20)
- write_vcf should use the reference sequence for REF, if present
- Number of variable sites (not just num_sites) HOT 1
- Add 'mid' property to Interval class
- Simpler, more efficient interface for pair coalescence rates HOT 6
- clarity on use of tskit.union() HOT 4
- Should 2-locus ratio statistics return NaN on 0/0? HOT 4
- Installing tskit on Windows HOT 7
- Use reusable workflows across repos? HOT 2
- Error pip install tskit on Windows HOT 2
- Add node_is_sample array HOT 2
- TreeSequence.f2 is not symmetric with multiallelic sites HOT 3
- Bug assertion in `ts.allele_frequency_spectrum` HOT 8
- Folded AFS between branch and site modes differs by factor of two HOT 7
- edges lost after merging two trees HOT 20
- Codecov upload issues HOT 1
- keep_intervals() giving _tskit.LibraryError: Can't squash, flush, simplify or link ancestors... HOT 7
- Update GitHub upload/download artefacts
- Add XTable.drop_metadata HOT 1
- trees.c Compilation Error HOT 2
- Split large numbers in html/cli print out.
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from tskit.