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Tim Sackton's Projects

comppopgen_ms icon comppopgen_ms

Final version of MK pipeline from larger analyses in collaboration with Allison Shultz (ajshultz) & Tim Sackton (tsackton)

phyloacc icon phyloacc

PhyloAcc a software to detect the changes of conservation of a genomic region

pydnase icon pydnase

Python module for the easy handling and analysis of DNase-seq data

r-novice icon r-novice

data carpentry materials for introduction to R

ratite-genomics icon ratite-genomics

Scripts and other material for the assembly and analysis of ratite genomes.

rerconverge icon rerconverge

Analysis of convergence between organismal traits and DNA/protein sequences

snparcher icon snparcher

Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.

stdpopsim icon stdpopsim

A library of standard population genetic models

taelgar-utils icon taelgar-utils

A collection of Python scripts to work with Taelgar Obsidian notes

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