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anvil-demo

WDLs and scripts used for may 2020 demo

backend-test

Example of a simple back-end app to demonstrate using multiple repos in a docker compose file

build-common

common build scripts used in c/c++ projects

codecheck

Developer Test

dd-on-fhir

Example data-dictionary representation using FHIR Shorthand (FSH)

deform

A Python HTML form library.

desnowball

snowball

eltools

Edwards Lab Tools

fhir-drill

Quick Coding Test Using FHIR Resources

gdbrcpp

C++ Version of Yaomin's GDBR function, using RcppArmadillo

graphcollab

Simple social network graph generation to be used to plot academic associations through publications

gwas-parsers

Pedigree, PLINK BED, transposed Pedigree and IMPUTE parsers for Python programs

hapi-fhir

Fork from HAPI JPA Server Project For POC Evaluation

ig-template-base

Base IG template managed by HL7 but usable by anyone (no logos). The foundation for most HL7-published IGs

include-linkml

LinkML Schema for INCLUDE DCC

libgwas

markdown-test

this is a test to show markdown

metaxcan

MetaXcan software and manuscript

mvtest

GWAS analysis

mxcovar

ncpi-fhir-ig-2

NCPI FHIR IG 2

ncpi-fhir-utility

🛠 FHIR model tooling (validation, xml/json conversion, publish to server)

ncpi-model-forge

🔥 The Project Forge FHIR model

ncpi-wstl-core

NCPI Core whistle project library.

obonet

OBO-formatted ontologies → networkx (Python 3)

pandasvcf

VCF parser using the Python pandas library

plink-ng

A comprehensive update to the PLINK association analysis toolset, currently focused on speed and memory efficiency improvements. Beta testing of the first release from this codebase (v1.90) is now in progress.

skills-hello-github-actions

My clone repository

skills-publish-packages

My clone repository

terra-workflow-example

Example workflow for Terra.bio -- Simple Loci extraction from gzipped VCF