Topic: structural-variants Goto Github
Some thing interesting about structural-variants
Some thing interesting about structural-variants
structural-variants,In this repository I backup the pipelines I write for the project I am involved
User: auroramaurizio
structural-variants,:mag: Post Assembly Variants Finder
Organization: bcgsc
structural-variants,Integrated analysis of Structural and Copy Number Variants on clinical targeted sequencing data
User: bdolmo
structural-variants,A structural variation pipeline for short-read sequencing
Organization: broadinstitute
structural-variants,Garvan KCCG Student Summer Research Project #1 Benchmarking structural variant callers on whole genome sequencing data
User: d-fuh
structural-variants,A snakemake workflow for regions of difference discovery in Mycobacterium tuberculosis complex (MTBC) samples
User: dbespiatykh
structural-variants,Structural Variants in cell-free tumor DNA
User: drvenki
structural-variants,MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.
Organization: gatb
structural-variants,Snakemake-based workflow for detecting structural variants in genomic data
Organization: googlingthecancergenome
Home Page: https://research-software.nl/software/sv-callers
structural-variants,Snakemake-based workflow for generating artificial genomes with structural variants
Organization: googlingthecancergenome
Home Page: https://research-software.nl/software/sv-gen
structural-variants,
User: hynst
structural-variants,The experiments performed in State-of-the-art structural variant calling: What went conceptually wrong and how to fix it?
Organization: itbe-lab
structural-variants,A repository containing code for a manuscript intended for Molecular Ecology.
User: janawold1
structural-variants,A snakemake pipeline to call structure variants from ONT data
Organization: jasonwong-lab
Home Page: https://github.com/jasonwong-lab/smk_sv
structural-variants,Testing structural variant (SV) callers for illumina germline whole genome sequence (WGS) data (human).
User: leahkemp
structural-variants,My work during internship in Walter+Eliza Hall Institute of Medical Research
User: litianzhou
structural-variants,Code, analysis, and results for Hawley, Zhou, et al., Cancer Research, 2021.
Organization: lupienlab
Home Page: https://cancerres.aacrjournals.org/content/early/2021/10/11/0008-5472.CAN-21-2056
structural-variants,Modular Multi-scale Integrated Genome Graph Browser
Organization: momi-g
Home Page: http://demo.momig.tokyo/
structural-variants,Call and score variants from WGS/WES of rare disease patients.
Organization: nf-core
Home Page: https://nf-co.re/raredisease
structural-variants,A nextflow variant benchmarking pipeline - premature
Organization: nf-core
Home Page: https://nf-co.re/variantbenchmarking
structural-variants,2110581 Bioinformatics I project - Structural variant detection
User: nonroute
structural-variants,Clinical Whole Genome and Exome Sequencing Pipeline
Organization: openomics
Home Page: https://openomics.github.io/genome-seek/
structural-variants,Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads
Organization: pacificbiosciences
structural-variants,Structural variant discovery and genotyping from mapped PacBio HiFi data
Organization: pacificbiosciences
structural-variants,Long read structural variants in rare disease cohort
Organization: smail-lab-cmh
structural-variants,Germline structural variant calling pipeline for short read WGS datasets
Organization: sydney-informatics-hub
structural-variants,Structural variant calling tutorial using long-reads.
User: tobiasrausch
structural-variants,POSTRE: Prediction Of STRuctural variant Effects
User: vicsanga
structural-variants,PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.
Organization: wglab
structural-variants,Genome assembly and variant benchmarks for Chinese Quartet
Organization: xjtu-omics
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