Comments (1)
- tests on metrics @danielStrobl
- PCR per batch (for cell cycle effect) @mumichae
- scaling of metrics
from scib.
Related Issues (20)
- ilisi_graph error HOT 3
- AttributeError: Can only use .cat accessor with a 'category' dtype (when running lisi() metric) HOT 3
- Add perfect score metric tests for isolated labels HOT 2
- louvain deprecation HOT 3
- Update integration methods
- Missing documentation for `cluster_optimal_resolution()`
- `cluster_optimal_resolution()` assumes argument order which can be incorrect for asymmetric metrics HOT 1
- isolated label scores do not return expected results HOT 1
- Error runing LISI when reading index file HOT 5
- FileNotFoundError when running ilisi metric HOT 3
- Error reading LISI index file HOT 2
- Question on publicly available reprocessed datasets HOT 1
- Metrics fail when there are unused labels HOT 1
- scanorama does not subset to HVG list HOT 1
- Possibility to report the cLISI score for each cluster?
- Comparing metrics from different embeddings
- Running scib.metrics.metrics() produces dataframe of NaNs HOT 1
- No such file or directory: '/tmp/lisi_gtjq4lmu/graph_lisi_indices_0.txt' HOT 2
- how to merge and integrate the TPM and raw counts matrix data HOT 1
- AttributeError: can't set attribute 'categories'
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from scib.