java.lang.NullPointerException: Cannot invoke "org.rdfhdt.hdt.compact.sequence.SequenceLog64Big.close() about qendpoint HOT 8 CLOSED

Can you send the log files? you can find it at this address: http://localhost:1234/actuator/logfile

you can replace localhost:1234 by your configured host:port

from qendpoint.

`�[2m2022-10-21 13:39:26.858�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m using applicationDirectory: /home/taferh/qendpoint
�[2m2022-10-21 13:39:26.859�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m locationHdt: /home/taferh/qendpoint/hdt-store/
�[2m2022-10-21 13:39:26.859�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m locationNative: /home/taferh/qendpoint/native-store/
�[2m2022-10-21 13:39:28.171�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:0
�[2m2022-10-21 13:39:28.174�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:0
�[2m2022-10-21 13:39:28.174�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:0
�[2m2022-10-21 13:39:28.175�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:0
�[2m2022-10-21 13:39:28.186�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:0
�[2m2022-10-21 13:39:28.187�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:0
�[2m2022-10-21 13:39:28.187�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:0
�[2m2022-10-21 13:39:28.187�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:0
�[2m2022-10-21 13:39:28.373�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.store.EndpointStore �[0;39m �[2m:�[0;39m CHECK IF A PREVIOUS MERGE WAS STOPPED
�[2m2022-10-21 13:39:28.613�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.compiler.CompiledSail �[0;39m �[2m:�[0;39m Threshold for triples in Native RDF store: 1000000 triples
�[2m2022-10-21 13:39:28.614�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.t.qendpoint.compiler.CompiledSail �[0;39m �[2m:�[0;39m Using storage mode http://the-qa-company.com/modelcompiler/endpointStoreStorage, optimized: true.
�[2m2022-10-21 13:39:29.276�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.s.b.w.embedded.tomcat.TomcatWebServer �[0;39m �[2m:�[0;39m Tomcat initialized with port(s): 1234 (http)
�[2m2022-10-21 13:39:29.300�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.apache.catalina.core.StandardService �[0;39m �[2m:�[0;39m Starting service [Tomcat]
�[2m2022-10-21 13:39:29.300�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36morg.apache.catalina.core.StandardEngine �[0;39m �[2m:�[0;39m Starting Servlet engine: [Apache Tomcat/9.0.65]
�[2m2022-10-21 13:39:29.419�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.a.c.c.C.[Tomcat].[localhost].[/] �[0;39m �[2m:�[0;39m Initializing Spring embedded WebApplicationContext
�[2m2022-10-21 13:39:29.419�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mw.s.c.ServletWebServerApplicationContext�[0;39m �[2m:�[0;39m Root WebApplicationContext: initialization completed in 4579 ms
�[2m2022-10-21 13:39:29.883�[0;39m �[33m WARN�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36m.s.s.UserDetailsServiceAutoConfiguration�[0;39m �[2m:�[0;39m

Using generated security password: b420335e-7956-472b-ac98-c3b03021f537

This generated password is for development use only. Your security configuration must be updated before running your application in production.

�[2m2022-10-21 13:39:30.097�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.s.b.a.w.s.WelcomePageHandlerMapping �[0;39m �[2m:�[0;39m Adding welcome page: class path resource [static/index.html]
�[2m2022-10-21 13:39:30.736�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.s.b.a.e.web.EndpointLinksResolver �[0;39m �[2m:�[0;39m Exposing 13 endpoint(s) beneath base path '/actuator'
�[2m2022-10-21 13:39:30.756�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.s.s.web.DefaultSecurityFilterChain �[0;39m �[2m:�[0;39m Will secure any request with [org.springframework.security.web.session.DisableEncodeUrlFilter@43e1692f, org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter@3e7c4815, org.springframework.security.web.context.SecurityContextPersistenceFilter@2b329bbd, org.springframework.security.web.header.HeaderWriterFilter@3491e86e, org.springframework.web.filter.CorsFilter@27df0f3d, org.springframework.security.web.authentication.logout.LogoutFilter@41fed14f, org.springframework.security.web.savedrequest.RequestCacheAwareFilter@118102ee, org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter@771d1ffb, org.springframework.security.web.authentication.AnonymousAuthenticationFilter@c35af2a, org.springframework.security.web.session.SessionManagementFilter@5f780a86, org.springframework.security.web.access.ExceptionTranslationFilter@71cb3139, org.springframework.security.web.access.intercept.AuthorizationFilter@7e736350]
�[2m2022-10-21 13:39:31.035�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mo.s.b.w.embedded.tomcat.TomcatWebServer �[0;39m �[2m:�[0;39m Tomcat started on port(s): 1234 (http) with context path ''
�[2m2022-10-21 13:39:31.055�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[ main]�[0;39m �[36mc.the_qa_company.qendpoint.Application �[0;39m �[2m:�[0;39m Started Application in 6.992 seconds (JVM running for 8.074)
+--------------------------------------------------+
| qEndpoint started at: http://localhost:1234/ |
+--------------------------------------------------+
�[2m2022-10-21 13:39:31.647�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-1]�[0;39m �[36mo.a.c.c.C.[Tomcat].[localhost].[/] �[0;39m �[2m:�[0;39m Initializing Spring DispatcherServlet 'dispatcherServlet'
�[2m2022-10-21 13:39:31.647�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-1]�[0;39m �[36mo.s.web.servlet.DispatcherServlet �[0;39m �[2m:�[0;39m Initializing Servlet 'dispatcherServlet'
�[2m2022-10-21 13:39:31.649�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-1]�[0;39m �[36mo.s.web.servlet.DispatcherServlet �[0;39m �[2m:�[0;39m Completed initialization in 2 ms
�[2m2022-10-21 13:41:10.733�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-4]�[0;39m �[36mc.t.q.controller.EndpointController �[0;39m �[2m:�[0;39m New query
�[2m2022-10-21 13:41:10.757�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-4]�[0;39m �[36mc.t.qendpoint.compiler.SparqlRepository �[0;39m �[2m:�[0;39m Running given sparql query: SELECT distinct * WHERE {
?subj ?pred ?obj .
}

�[2m2022-10-21 13:41:25.402�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.q.controller.EndpointController �[0;39m �[2m:�[0;39m Trying to index chebi.owl
�[2m2022-10-21 13:41:25.404�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Clear old store
�[2m2022-10-21 13:41:25.404�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.store.EndpointStore �[0;39m �[2m:�[0;39m Shutdown merge
�[2m2022-10-21 13:41:25.404�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.store.EndpointStore �[0;39m �[2m:�[0;39m Shutdown A
�[2m2022-10-21 13:41:25.406�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.store.EndpointStore �[0;39m �[2m:�[0;39m Shutdown B
�[2m2022-10-21 13:41:25.406�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.store.EndpointStore �[0;39m �[2m:�[0;39m Shutdown done
�[2m2022-10-21 13:41:25.411�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Maximal available memory 877281753
�[2m2022-10-21 13:41:25.485�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Compressing #0
�[2m2022-10-21 13:41:25.487�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Create TEMP NT file '/home/taferh/qendpoint/hdt-store/chebi.owl.000.hdt-tmp.nt'
�[2m2022-10-21 13:42:02.290�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m NT file created, generating HDT...
�[2m2022-10-21 13:43:11.200�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:25
�[2m2022-10-21 13:43:11.436�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:11
�[2m2022-10-21 13:43:11.437�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:27
�[2m2022-10-21 13:43:12.234�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:23
�[2m2022-10-21 13:43:12.311�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:1062388
�[2m2022-10-21 13:43:12.324�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:2839496
�[2m2022-10-21 13:43:12.343�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:636
�[2m2022-10-21 13:43:12.344�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:50792501
�[2m2022-10-21 13:43:12.982�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Competed into /home/taferh/qendpoint/hdt-store/chebi.owl.000.hdt
�[2m2022-10-21 13:43:12.983�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Compressing #1
�[2m2022-10-21 13:43:12.983�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Create TEMP NT file '/home/taferh/qendpoint/hdt-store/chebi.owl.001.hdt-tmp.nt'
�[2m2022-10-21 13:43:16.692�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m NT file created, generating HDT...
�[2m2022-10-21 13:43:23.424�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:22
�[2m2022-10-21 13:43:23.450�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:11
�[2m2022-10-21 13:43:23.451�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:24
�[2m2022-10-21 13:43:23.549�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m numbits:20
�[2m2022-10-21 13:43:23.555�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:74387
�[2m2022-10-21 13:43:23.556�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:351369
�[2m2022-10-21 13:43:23.558�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:468
�[2m2022-10-21 13:43:23.558�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.r.h.d.i.s.PFCDictionarySectionBig �[0;39m �[2m:�[0;39m datasize:5184300
�[2m2022-10-21 13:43:23.660�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Competed into /home/taferh/qendpoint/hdt-store/chebi.owl.001.hdt
�[2m2022-10-21 13:43:23.660�[0;39m �[32m INFO�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mc.t.qendpoint.controller.Sparql �[0;39m �[2m:�[0;39m Cat /home/taferh/qendpoint/hdt-store/chebi.owl.001.hdt
Generating dictionary
PREDICATES-------------------
SUBJECTS-------------------
OBJECTS-------------------
SHARED-------------------
�[2m2022-10-21 13:44:15.012�[0;39m �[31mERROR�[0;39m �[35m99918�[0;39m �[2m---�[0;39m �[2m[nio-1234-exec-5]�[0;39m �[36mo.a.c.c.C.[.[.[/].[dispatcherServlet] �[0;39m �[2m:�[0;39m Servlet.service() for servlet [dispatcherServlet] in context with path [] threw exception [Request processing failed; nested exception is java.lang.NullPointerException: Cannot invoke "org.rdfhdt.hdt.compact.sequence.SequenceLog64Big.close()" because "this.blocks" is null] with root cause

java.lang.NullPointerException: Cannot invoke "org.rdfhdt.hdt.compact.sequence.SequenceLog64Big.close()" because "this.blocks" is null
at org.rdfhdt.hdt.dictionary.impl.section.PFCDictionarySectionBig.close(PFCDictionarySectionBig.java:508) ~[hdt-java-core-3.0.4.jar!/:na]
at org.rdfhdt.hdt.dictionary.impl.FourSectionDictionaryBig.close(FourSectionDictionaryBig.java:167) ~[hdt-java-core-3.0.4.jar!/:na]
at org.rdfhdt.hdt.hdt.impl.HDTImpl.cat(HDTImpl.java:628) ~[hdt-java-core-3.0.4.jar!/:na]
at org.rdfhdt.hdt.hdt.HDTManagerImpl.doHDTCat(HDTManagerImpl.java:166) ~[hdt-java-core-3.0.4.jar!/:na]
at org.rdfhdt.hdt.hdt.HDTManager.catHDT(HDTManager.java:313) ~[hdt-api-3.0.4.jar!/:na]
at com.the_qa_company.qendpoint.controller.Sparql.compressToHdt(Sparql.java:620) ~[classes!/:1.7.0]
at com.the_qa_company.qendpoint.controller.Sparql.loadFile(Sparql.java:546) ~[classes!/:1.7.0]
at com.the_qa_company.qendpoint.controller.EndpointController.clearData(EndpointController.java:135) ~[classes!/:1.7.0]
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:na]
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source) ~[na:na]
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source) ~[na:na]
at java.base/java.lang.reflect.Method.invoke(Unknown Source) ~[na:na]
at org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:205) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:150) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:117) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:895) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:808) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:1070) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:963) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:1006) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:909) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at javax.servlet.http.HttpServlet.service(HttpServlet.java:681) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:883) ~[spring-webmvc-5.3.22.jar!/:5.3.22]
at javax.servlet.http.HttpServlet.service(HttpServlet.java:764) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:227) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53) ~[tomcat-embed-websocket-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:337) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.access.intercept.AuthorizationFilter.doFilterInternal(AuthorizationFilter.java:73) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:122) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:116) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:126) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:81) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:109) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:149) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:103) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:89) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.CorsFilter.doFilterInternal(CorsFilter.java:91) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.header.HeaderWriterFilter.doHeadersAfter(HeaderWriterFilter.java:90) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:75) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:112) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:82) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:55) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.session.DisableEncodeUrlFilter.doFilterInternal(DisableEncodeUrlFilter.java:42) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:346) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:221) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:186) ~[spring-security-web-5.7.3.jar!/:5.7.3]
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:354) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:267) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.web.filter.RequestContextFilter.doFilterInternal(RequestContextFilter.java:100) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.web.filter.FormContentFilter.doFilterInternal(FormContentFilter.java:93) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.boot.actuate.metrics.web.servlet.WebMvcMetricsFilter.doFilterInternal(WebMvcMetricsFilter.java:96) ~[spring-boot-actuator-2.7.3.jar!/:2.7.3]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:201) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117) ~[spring-web-5.3.22.jar!/:5.3.22]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:197) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:97) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:541) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:135) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:78) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:360) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:399) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:890) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1789) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659) ~[tomcat-embed-core-9.0.65.jar!/:na]
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) ~[tomcat-embed-core-9.0.65.jar!/:na]
at java.base/java.lang.Thread.run(Unknown Source) ~[na:na]
`

from qendpoint.

@ht-tdp sorry, could you also share the link of the dataset? I cannot see the problem form the logs .....

from qendpoint.

@D063520 : file can be downloaded from here: https://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl

from qendpoint.

I fixed it in dev. Will wait for @ate47, if he is fine with it we are going to make a new release with this and a couple of smaller patches ....

from qendpoint.

#171 fine for me

from qendpoint.

the new release with the fix is out. You can find it here:

https://github.com/the-qa-company/qEndpoint/releases/tag/v1.7.1

Also note that you can query for things like this:

PREFIX search: http://www.openrdf.org/contrib/lucenesail#
SELECT * WHERE {
?subj search:matches [
search:query "hypnotics";
search:score ?score;
search:snippet ?snippet ] .
}

from qendpoint.

Thanks a lot! This works great!

from qendpoint.