Tyll Stöcker's Projects
R Shiny web application for the inspection, filtering & analysis of results generated by the A2TEA pipeline
Automated Assessment of Trait-specific Evolutionary Adaptations
🤹 Shiny tips & tricks for improving your apps and solving common problems
Snakemake wrapper for AHRD
April and Tyll's Food & Travel Blog
Version 5 of the CAFE phylogenetics software
RStudio Cheat Sheets
Course website "Docker and Singularity for reproducible research: getting started with containers"
Calculate and plot distributions of genomic ranges
A pipeline for the analysis of iPool-Seq data
An introduction to Bayesian statistics
Merging tool for AHRD output tables
A modern and intuitive terminal-based text editor
mapping (MuWU) insertions on different reference assemblies
Mu-seq Workflow Utility
Alignment based workflow for Illumina Short reads
Collection of learning material and personal projects all about Rust
Useful code snippets and tricks for the Microsoft world: Azure, PowerShell, M365, etc.
Nextflow course 2021
Website hosted at https://sib-swiss.github.io/single-cell-training/latest/
A first fun and short presentation done with quarto
Useful sed scripts & patterns.
As part of a set of analysis pipeline comparisons organized by the West German Genome Center, this particular workflow is designed to analyze Whole Exome Sequencing samples.
Scripts for WGCNA network analysis and correlation with microbial taxonomy traits