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agplus icon agplus

a rapid and flexible tool for aggregation plots

awesome icon awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

awesome-deepbio icon awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-single-cell icon awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bamkit icon bamkit

Tools for common BAM file manipulations

baselines icon baselines

OpenAI Baselines: high-quality implementations of reinforcement learning algorithms

bcbb icon bcbb

Useful bioinformatics code, primarily in Python and R

biotools icon biotools

A list of useful bioinformatics resources

blogs icon blogs

Links to data science, bioinformatics, statistics, and machine learning resources

cloudbiolinux icon cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

combinatorial-optimization icon combinatorial-optimization

The accompanying code for my article: https://becominghuman.ai/probabilistic-approaches-to-combinatorial-optimization-2aa0397a795f

coursera-statistics-one--r icon coursera-statistics-one--r

Statistics One is designed to be a comprehensive yet friendly introduction to fundamental concepts in statistics. Comprehensive means that this course provides a solid foundation for students planning to pursue more advanced courses in statistics. Friendly means exactly that. The course assumes very little background knowledge in statistics and introduces new concepts with several fun and easy to understand examples. This course is, quite literally, for everyone. If you think you can't learn statistics, this course is for you. If you had a statistics course before but feel like you need a refresher, this course is for you. Even if you are a relatively advanced researcher or analyst, this course provides a foundation and a context that helps to put one’s work into perspective. Statistics One also provides an introduction to the R programming language. All the examples and assignments will involve writing code in R and interpreting R output. R software is free! What this means is you can download R, take this course, and start programming in R after just a few lectures. That said, this course is not a comprehensive guide to R or to programming in general.

courses icon courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

cruzdb icon cruzdb

python access to UCSC genomes database

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

dataviz icon dataviz

A book covering the fundamentals of data visualization.

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