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azure-pytest

bengali-ocr

Bengali optical character recognition

bids-validator

Placeholder. This content has moved to https://github.com/bids-standard/bids-validator

bidsonym

a BIDS app for pseudo-anonymization of neuroimaging data

boto

For the latest version of boto, see https://github.com/boto/boto3 -- Python interface to Amazon Web Services

cnn-diffusion-mribrain-segmentation

CNN based brain masking

covid-19-data

An ongoing repository of data on coronavirus cases and deaths in the U.S.

cpython

The Python programming language

darts

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

dash-umap-demo

UMAP plot generation using https://dash.plotly.com/

dbxcli

A command line client for Dropbox built using the Go SDK

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

distraction-recognition-of-a-driver

Identifying distraction activities of a driver by tracking his body parts in real time during driving

dmriharmonization

Multi-site dMRI harmonization

docker-azure

CI/CD of Docker containers through Azure DevOps

docker.github.io

Source repo for Docker's Documentation

dplocate

Help https://github.com/dptools/dplocate management

duplicity

mirror of duplicity: https://code.launchpad.net/duplicity

eigen-git-mirror

Git mirror of the official Eigen's repository -- PULL REQUEST MUST BE SENT TO: https://bitbucket.org/eigen/eigen

extensionsindex

Slicer extensions index

fastsurfer

PyTorch implementation of FastSurferCNN

fsl-containers

Experimental fsl containers for learning purpose, consult fsl license at https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Licence

glxgears-containers

A comprehensive tutorial for running OpenGL apps on containers

hackingthevisualnorm

The interactive slides of my talk "Hacking the Visual Norm"

hcppipelines

Processing pipelines for the HCP

homework_instructions

2020 homework instructions

image-recognition-using-cnn

Image recognition using CNN architecture by Zeiler and Fergus

image-stitching-project

Course project on stitching a sequence of images using computer vision algorithms

luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.