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taoshengqiansui's Projects

2smr icon 2smr

Code and data necessary to replicate the findings of the paper "Mendelian randomization evidence for the causal effects of socioeconomic inequality on human longevity among Europeans"

atacseq icon atacseq

ATAC-seq peak-calling, QC and differential analysis pipeline

broad-prod-wgs-germline-snps-indels icon broad-prod-wgs-germline-snps-indels

Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://github.com/gatk-workflows/five-dollar-genome-analysis-pipeline

exmdb icon exmdb

All codes about ExMdb data processing

gwas icon gwas

UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies

knitr icon knitr

A general-purpose tool for dynamic report generation in R

koopa icon koopa

Shell bootloader for bioinformatics.

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