Comments (1)
swharden
commented on August 24, 2024
I got pyABF running on Python 2.7 without much headache. It ran on a fresh Anaconda installation with just numpy installed. I made the pyabf2 module which can be downloaded and imported by anyone wanting to use pyABF on Python 2.7: https://github.com/swharden/pyABF/tree/master/dev/python27_version/
The few code modifications related to removal of f-strings and a reference to a binary reader which changed from python 2 to 3. Advanced functions (e.g., memtest capacitance calculation?) may not work, but core ABF reading functions should be fine.
I think Python 3.6 should continue to be the minimum required version, and modern versions of numpy will also be coded against.
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Related Issues (20)
- how to display command current (sweepC vs. channel=1) HOT 3
- remove assertion that waveforms must have 8 digital outputs
- explore support for variable-length sweeps HOT 3
- pyabf compatibility with pyInstaller HOT 4
- Support protocols with user list epoch durations HOT 10
- add type hints and improve documentation
- ABF() should accept a pathlib.Path
- Stop warning when invalid dates are detected
- refactor header reader into smaller files
- AttributeError in module pyabf.tools when trying to use Memtest HOT 2
- Fails to load files with more adc channels than dac channels HOT 3
- ABF.sampleRate
- FFT/Spectrogram analysis of ABF data HOT 10
- Memory usage builds up when iteratively open abf files HOT 6
- Tutorial code - Plot the Command Waveform HOT 1
- add return types to properties HOT 5
- investigate memory management in long-running applications HOT 2
- error: unpack requires a buffer of 1 bytes (end of file reached) HOT 5
- Folder loop with pyabf HOT 2
- parent/child grouping
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