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argweaver

Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)

atomic-algolia

An NPM package for running atomic updates to an Algolia indices

base-ml

clover-iiif

Extensible IIIF front-end toolkit and Manifest viewer. Accessible. Composable. Open Source.

deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

discourse-machine-learning

An open source project that gives tools and utilities for applying machine learning tools to Discourse Forums (https://discourse.org).

hugodocs

The source for https://gohugo.io/

linkedom

A triple-linked lists based DOM implementation.

mash

Fast genome and metagenome distance estimation using MinHash

mathjax-src

MathJax source code for version 3 and beyond

molcloud

Make a bunch of molecules

msms

A coalsecent simulator with selection

msprime

A reimplementation of Hudson's classical ms simulator for modern data sets.

one-click-hugo-cms

openbabel

Open Babel is a chemical toolbox designed to speak the many languages of chemical data.

opentelemetry-cpp-contrib

pandasthumb.github.io

proplot

🎨 A succinct matplotlib wrapper for making beautiful, publication-quality graphics

rdkit

The official sources for the RDKit library

rdkit-stubs

scaffoldgraph

ScaffoldGraph is an open-source cheminformatics library, built using RDKit and NetworkX, for the generation and analysis of scaffold networks and scaffold trees.

sourmash

Compute and compare MinHash signatures for DNA data sets.

starter-hugo-research-group

swamidass

swamidass.github.io

A beautiful, simple, clean, and responsive Jekyll theme for academics

swamidass_cv

S. Joshua Swamidass's CV

tailwind-nextjs-starter-blog

This is a Next.js, Tailwind CSS blogging starter template. Comes out of the box configured with the latest technologies to make technical writing a breeze. Easily configurable and customizable. Perfect as a replacement to existing Jekyll and Hugo individual blogs.

tensorflow

Computation using data flow graphs for scalable machine learning

test-submodule-netlify

wsi