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svicario's Projects

biojs icon biojs

A library of JavaScript components to represent biological data

mrbayespptest icon mrbayespptest

Posterior predictive test of partitioned model of nucleotide estimated wiht MrBayes. The simuation part is powered by Evolver of PAML package

pan icon pan

Phylogenetic Asignment Namer, using SILVAdb plus out of the shelf denoising(vsearch), alignment (infernal) and placement (EPA-ng)

phyloh icon phyloh

The script estimate the phylogenetic entropy and the phylogenetic mutual information across sample given a reference tree and a table of observations

phylohws icon phylohws

how to contact JST web service to run PhyloH

ppresil icon ppresil

Estimates Mean, Coefficient of Variation, Day of the Year of maximum, and standard Deviation of yearly anomalies for a time series of Vegetation index.

treeposteriorpredictor icon treeposteriorpredictor

Perform a Posterior Predictive test to validate phylogenetic inference done with MrBayes and ExaBayes

wekeoppget icon wekeoppget

Python wrapper for wekeo API to download HR-VPP copernicus product

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