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Nan Du's Projects

17spr_wang_zhu_du icon 17spr_wang_zhu_du

2017 Spring CSE 847 class project repository for Wei Wang, Zhuangdi Zhu, and Nan Du.

aind-nlp icon aind-nlp

Coding exercises for the Natural Language Processing concentration, part of Udacity's AIND program.

aind2-rnn icon aind2-rnn

Project materials for RNN segment of AIND nanodegree

arboretum icon arboretum

Gradient Boosting powered by GPU(NVIDIA CUDA)

biobloom icon biobloom

Create Bloom filters for a given reference and then to categorize sequences

blasr icon blasr

BLASR: The PacBio® long read aligner

daligner icon daligner

Find all significant local alignments between reads

deep-learning-v2-pytorch icon deep-learning-v2-pytorch

Projects and exercises for the latest Deep Learning ND program https://www.udacity.com/course/deep-learning-nanodegree--nd101

deepfam icon deepfam

Deep learning based alignment-free method for protein family modeling and prediction

frame-pro icon frame-pro

FRAME-Pro is a free tool using HMM to correct errors in PacBio reads

groupk icon groupk

An overlap detection tool for PacBio reads

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