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Solon P. Pissis's Projects

asmf icon asmf

Approximate String Matching via Filtering

aw icon aw

AW: computing Avoided (or Overabundant) Words for biological sequence analysis

bd-anchors icon bd-anchors

Bidirectional string anchors: a New String Sampling Mechanism.

csc icon csc

Circular Sequence Comparison

ius icon ius

Indexing Uncertain Strings for Long Patterns

maw icon maw

MAW: a suite on the computation and application of Minimal Absent Words

miss icon miss

miss: identifying MISlabeled Species

motex icon motex

MoTeX: A word-based HPC tool for single and structured MoTif eXtraction

real icon real

REAL: an efficient REad ALigner for next-generation sequencing reads

rmqo icon rmqo

How to answer a small batch of RMQs or LCA queries in practice

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