Comments (2)
Yes! You can pass a seed to model.restart(seed = your_seed)
We have been using this to do high-throughput design and then reproduce the trajectory of the best designs for animations.
from colabdesign.
Perfect, thanks!
from colabdesign.
Related Issues (20)
- critical typo in kmeans.py (simport instead of import) HOT 1
- Can we see generated sequences other than final one? HOT 1
- The sequence in design.fasta is different from the sequence in best.pdb HOT 5
- How to predict the Cyclic Peptide's structure by a given sequence
- Problem in designability_test.py HOT 2
- WARNING: 'model_1_ptm' not found HOT 1
- Using RFdiffusion to design a binder, with some parts of the binder fixed HOT 6
- where is the output file when finish the model.design_3stage() run? HOT 1
- atom index in af.prep.prep_pdb HOT 1
- Any plans to add af2seq to the colab design
- MPNN designed sequence not separated correctly with multiple targets and multiple binders HOT 2
- Patch fix_partial_contigs when residue numbering in PDB has a gap HOT 2
- Allow to select the Complex_beta_ckpt model in RFdiffusion colab?
- Translate colab for RFdiffusion to a jupyter notebook?
- How to get PAE files when running RFdiffusion
- Is it possible to bypass the design step of AfDesign?
- Do the soft iterations in pssm_semigreedy obey the bias matrix
- fix_pos in af/fixbb HOT 2
- Partially folding a structure using AF
- How to continue a design run?
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