Comments (4)
good point - I'll have a look into EDAM and bring it also to Bioc.
from xcms.
Having a quick look I am wondering: is it possible to annotate multiple EDAM terms to a e.g. SummarizedExperiment
? We will for examples have:
- feature metadata (information on measured entities; maybe data_0842 )
- sample annotation (could be data_3113)
- abundance estimates (seems such a generic term does not yet exist in EDAM).
from xcms.
No, there is no way how to have one edam term map to multiple others I think. The other option would be to describe XCMS by using all of these terms basically.
from xcms.
The xcms:multipleTerms annotation is not a limitation of EDAM. bio.tools or Workflowhub or the Bioschemas-beefed-up xcms Vignette could (untested!) allow to annotate a list of EDAM terms . Yours, Steffen
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from xcms.