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cksakura avatar cksakura commented on July 16, 2024 1

from flashlfq.

trishorts avatar trishorts commented on July 16, 2024

we'll get on this shortly.

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rmillikin avatar rmillikin commented on July 16, 2024

Sorry about that - the latest version should be able to parse generic PSM input. The readme has been updated slightly too, since some of the parameters have changed recently and the readme was out of date.

The crash is a little more involved. I can take a stab at it and guess that the monoisotopic mass in your PSM file may not be consistent between Modified Sequences. Can you double check that you only have one monoisotopic mass per Mod Sequence?

If it's not that (or if you're not sure), are you able to share your PSM file along with one or more of your mzML files?

You may email them to me at [email protected] .

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KaiLiCn avatar KaiLiCn commented on July 16, 2024

I also met this issue. The data I used was from FlashLFQ-master\Test\SampleFiles in the download package.

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trishorts avatar trishorts commented on July 16, 2024

We'll look at it shortly.

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rmillikin avatar rmillikin commented on July 16, 2024

Hello Kai,

Please make sure your FlashLFQ is the latest version. I'm also not sure if that mzML included in that particular sample file is up to date. I'll upload a new sample files package here, attached.

SampleFiles.zip

from flashlfq.

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