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skjq's Projects

3d_alignment_viewer icon 3d_alignment_viewer

A 3D structure based protein sequence alignment viewer to select important residues

access-r-source icon access-r-source

How to get at R source. I am sick of Googling this. I am writing it down this time.

adjutant icon adjutant

Runs a pubmed query, returns results and allows user to explore high-level structure of returned documents

bionev icon bionev

Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations"

bitmab2-tutorials icon bitmab2-tutorials

Workshop materials for the Second Benthic Invertebrates, Metagenomics, and Bioinformatics Workshop at the TAMUCC Harte Institute in Corpus Christi, TX (January 15-19, 2018)

bookdown icon bookdown

Authoring Books and Technical Documents with R Markdown

cheatsheets-ai icon cheatsheets-ai

Essential Cheat Sheets for deep learning and machine learning researchers https://medium.com/@kailashahirwar/essential-cheat-sheets-for-machine-learning-and-deep-learning-researchers-efb6a8ebd2e5

crc_meta icon crc_meta

Code and analysis results for the CRC shotgun meta-analysis

datasets icon datasets

A collection of datasets of ML problem solving

dcf icon dcf

The implement of paper Deep Collaborative Filtering

dcf_plus icon dcf_plus

A method using Matrix completion to predict relationship of genes and diseases

dnilmf icon dnilmf

DTI predictions by dual-network integrated logistic matrix factorization

docs icon docs

TensorFlow documentation

dtinet icon dtinet

A Network Integration Approach for Drug-Target Interaction Prediction

fijicomp_transmission icon fijicomp_transmission

Scripts from Brito, Gurry et. al for computing transmission-related metrics from shotgun metagenomics data.

findpapers icon findpapers

Findpapers is an application that helps researchers who are looking for references for their work

genebridge icon genebridge

Integrative systems analysis identifying the associations between genes and biological process or modules.

genetictools icon genetictools

The R-package GeneticTools is a loose collection of tools for the analysis of expression and genotype data, currently with main focus on eQTL and MDR analysis.

genomictools icon genomictools

:exclamation: This is a read-only mirror of the CRAN R package repository. GenomicTools — Collection of Tools for Genomic Data Analysis

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