Comments (5)
pbellec
commented on September 6, 2024
Done http://niak.simexp-lab.org/niak_installation.html . But it needs to be further improved and tested.
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poquirion
commented on September 6, 2024
I am working on a full docker simex/niak installation and running protocol on the website_update_28mai branch
Will insist on Ubuntu, OSX, Fedora/centOS and debian distro.
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poquirion
commented on September 6, 2024
merge website_update_28mai with gh-pages. Still need to add the procedure for debian with the XAUTH setup http://stackoverflow.com/a/25280523/2367407
Also, still need to test the gui procedure on a mac
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poquirion
commented on September 6, 2024
Tried to get gui working with the new mac procedure for docker with no effect around April 1st.
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poquirion
commented on September 6, 2024
refer to issue #108
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Related Issues (20)
- user can't download niak because it is too big HOT 3
- Errors running NIAK pre-processing pipeline HOT 15
- NIAK ADHD-200 Data: Mean FD motion values
- niak_brick_anat2stereolin is not robust to spaces in the file name
- regress_confounds failure HOT 6
- verbose broken in `niak_brick_regress_confounds`
- missing parameter `nb_vol_min` in the doc of `niak_brick_regress_confounds`
- most of octave svds tests fails ( niak-cog docker) HOT 3
- running NIAK singularity with slurm system HOT 3
- crash using compcor
- qc_motion report crashing for erroneous subjects
- NIAK throws an error saying it can't find an image but still tries to preprocess image
- if the fieldname of files_in structure is too long psom throws an error saying the structure does not exist HOT 1
- niak clogs /tmp and kills the OS HOT 4
- test that niak does not leave files in the tmp HOT 1
- better bids-app and boutique support
- replace the bids parser by a call to pybids
- https online version of the doc is not working HOT 5
- Is motor fMRI data essential to the NIAK pipeline? HOT 1
- add support for non-uniformity correction
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