Name: Scott Sibole
Type: User
Company: University of Calgary
Bio: I am a biomedical engineer with an interest in the mechanics of soft tissue. I develop software to enable data analysis from experiment and simulation.
Location: Calgary, Alberta, Canada
Scott Sibole's Projects
This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representation of Ligands and 3D Structure of Protein Binding Sites"
Automates the multiscale finite element modelling process for tissue to cellular scales. The original implementation was aimed at usage in articular cartilage, but may be extended to other applications.
Carl Compliant Beamer slide theme
Github Action to deploy conda package to Anaconda repository
My dotfiles
Start solving PDEs in Julia with Gridap.jl
A Python module to enable deformable image registration of 3D images with photobleached grids under mechanical loading.
My neovim configs.
2-D segmentation and analysis of the pericellular matrix surrounding chondrocytes
A Python module for processing and visualizing poroelastic/viscoelastic material testing data.
pyCellAnalyst is a Python module for 3D reconstruction and deformation analysis of biological objects.
A Python API for FEBio
Generate tetrahedral meshes of a simplified medial knee compartment with an arbitrary number of cartilage lesions with arbitrary size and depth.
Wraps a C++ binary for creating high-quality tetrahedral meshes from polygon surfaces using the Computational Geometry Algorithms Library (CGAL).