shivamsharma13 Goto Github PK
Name: Shivam Sharma
Type: User
Bio: Bioinformatician
Location: Atlanta, GA
Shivam Sharma's Projects
bioinformatics-utils
Comprises python scripts that I used to modify or filter datasets to prepare files suitable for bioinformatics tools or downstream analysis.
codingblocks-pandora
computationalgenomics2022
This class is taught at Georgia Institute of Technology.
cpu-temp-indicator
Temperature indicator for Ubuntu.
daily-news-semantic-web
Daily News search engine based on Semantic Technologies
dynamicpca
equity-vs-fixed-deposit
fan-speed-indicator
A simple fan speed indicator for Ubuntu (Linux).
fulbright-symposium-2021
This repository contains jupyter notebooks for Fulbright Cátedra (symposium), August 2021.
gdc-tcga-file-fetcher
A python utility to get data, with custom filters, from Genomic Data Commons (GDC) via their API.
genome-assembly-pipeline
A de novo genome assembly pipeline for extracting the genome of an unknown pathogen sequenced on Illumina MiSeq machine.
ggsipu-placement-cell-portal
Web portal for the placement cell of GGSIP University
igen-webserver
An app that can give you relative risk estimates for multiple common infections by looking at your personal genome
recursively-recursive
Practicing some basic recursion problems to get better at it.
researchscripts
The repository has multiple scripts in R & Python that I have used in the past to perform certain analysis in the broad area of human population genetics and health disparities.
rna-seq-pipelines
RNA-Seq pipelines that incorporate popular tools for Quantification and Differential Gene Expression. Kallsito, Salmon, Sleuth, and DESeq.
roads-of-biology
Here are some basic python scripts working for computational problems in Biology.
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