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awesome-transformers-in-medical-imaging

A collection of resources on applications of Transformers in Medical Imaging.

brain_3d_vessel_datasets

The public brain 3D vessel datasets, include TubeTK and MIDAS.

c-rsp

denoising-diffusion-pytorch

Implementation of Denoising Diffusion Probabilistic Model in Pytorch

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

eeg-gnn-ssl

graph_datasets

A Repository of Benchmark Graph Datasets for Graph Classification (31 Graph Datasets In Total).

han

Heterogeneous Graph Neural Network

hebraingnn

hegcl

source code for "HeGCL: Advance Self-Supervised Learning in Heterogeneous Graph-level Representation"

hetsann

Source Codes of HetSANN in the AAAI'20 paper: An Attention-based Graph Nerual Network for Heterogeneous Structural Learning.

hgsl

Source code of AAAI21-Heterogeneous Graph Structure Learning for Graph Neural Networks

jdda-implementation-pytorch

lrgb

Long Range Graph Benchmark, NeurIPS 2022 Track on D&B

mae

PyTorch implementation of MAE https//arxiv.org/abs/2111.06377

mdf

Magnetic Particle Imaging Data Format

monai

AI Toolkit for Healthcare Imaging

mse

MATLAB Multiview Spectral Embedding

non-localgcn

opticalflow3d

GPU/CUDA optimized implementation of 3D optical flow algorithms such as Farneback two frame motion estimation and Lucas Kanade dense optical flow algorithms.

pytorch-srresnet

pytorch implementation for Photo-Realistic Single Image Super-Resolution Using a Generative Adversarial Network arXiv:1609.04802

research-contributions

Implementations of recent research prototypes/demonstrations using MONAI.

selar

Official PyTorch Implementation of "Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphs". NeurIPS 2020.

speech-enhancement

Deep learning for audio denoising

textlevelgnn

A PyTorch implementation for the TextLevelGNN [EMNLP'19] "Text Level Graph Neural Network for Text Classification"