shadizaheri Goto Github PK

bam_contamination

bioinformatics-with-python-cookbook-second-edition

Bioinformatics with Python Cookbook Second Edition, published by Packt

code_snippets

damage_classification_cnn_post_fire_satellite

CNN analysis of post-fire satellite images for detection and classification of post-fire damaged houses.

eda_analysis_sat_tests

gatk

Official code repository for GATK versions 4 and up

gatk-sv

A structural variation pipeline for short-read sequencing

hdbscan

A high performance implementation of HDBSCAN clustering.

hifi-human-wgs-wdl

To import to dockstore and terra

horsefish

householderbpca

Rotation Invariant Householder Parameterization for Bayesian PCA

machine-learning-and-simulation

All the handwritten notes and source code files used in my YouTube Videos on Machine Learning & Simulation (https://www.youtube.com/channel/UCh0P7KwJhuQ4vrzc3IRuw4Q)

mue

A package for making MuE observation models in Edward2.

my_portfolio_html_saied_mighani

prml

PRML algorithms implemented in Python

probabilistic-programming-and-bayesian-methods-for-hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

probabilisticprogrammingprimer

pyro

Deep universal probabilistic programming with Python and PyTorch

python_tutorials

Python tutorials in both Jupyter Notebook and youtube format.

qucik_tools

quick_tools

statistics_with-python-specialization

This repo contains everything I learnt and did during the specialization training in Statistics with Python Specialization offered by the University of Michigan on Coursera.

styleguide

Style guides for Google-originated open-source projects

theseus-pp

Protein superposition using probabilistic programming in Pyro